Sponsored Links
Fractionation by Size
Small Volume Liquid Phase Recovery Use Before or After Solution IEF
www.proteindiscovery.com
Electronic Lab Notebook
CERF by Rescentris Inc. Compliant Bioscience ELN Software
rescentris.com
Biological Data Analysis
Try Ingenuity Pathways Analysis. Download Your Free Trial Today!
www.ingenuity.com
Directory Sites
The SWISS-PROT database contains high-quality annotation, is non-redundant and cross-referenced to many other databases. SWISS-PROT is accompanied by TrEMBL, a computer-annotated supplement, which contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database, which are not yet integrated into SWISS-PROT.
www.ebi.ac.uk
Quaternary Structure Prediction
An experimental bioinformatics server. Classifies protein sequences as homodimers or non-homodimers. Applications: metabolic reconstruction, protein structure and function assignment, and drug-design.
mericity.com
The Protein Information Resource
In collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database --- a comprehensive, annotated, and non-redundant set of protein sequence databases in which entries are classified into family groups and alignments of each group are available.
pir.georgetown.edu
InterPro - The Integrated Resource of Protein Domains and Functional Sites.
A database built from Pfam, PRINTS and PROSITE.
www.ebi.ac.uk
Combinatorial Extension of Polypeptides
Method for finding 3-D similarities in protein structures from the UCSD Supercomputer Center.
cl.sdsc.edu
Munich Information Center for Protein Sequences (MIPS)
Bioinformatics research group offering organism specific information (Yeast, Cress) as well as search tools for public databases.
mips.gsf.de
Entelechon Backtranslation tool
Online backtranslation tool for translating a protein sequence into a DNA sequence. The codon usage can be downloaded from a database and adjusted manually for each amino acid, if required. Java applet.
www.entelechon.com
Provides automatic hierarchical classification of proteins sequences.
www.protonet.cs.huji.ac.il
Most widely used server for analysing protein sequences, searching protein databases, and predicting protein structure - from Columbia Univ.
cubic.bioc.columbia.edu
Molecular Biology Tools Online
Includes WebOligoMelt (Annealing temperature of oligonucleotides), Virtual Ribosome (translate nucleotide sequences into peptides), and SeqScanGraph (graph melting temperature along nucleotide chain).
mbt.biobitfield.com
Collection of human (swall) proteins, crossreferences to major prediction servers. Supported predictions from: smart, string, blast, swall, mapview, sosui, ipsort and ncbi conserved domains.
harvester.embl.de
Ab initio predictions of protein function from protein sequence. The method works by integrating various predicted post-translational and localizational aspects of the proteins submitted.
www.cbs.dtu.dk
Automated comparative (homology) protein modelling, including an interactive mode which highlights known domains and allows users to select and align templates.
www.bmm.icnet.uk
Combines sequence and structural information for predicting the structure and/or function of your protein sequence, and can detect remote homologies beyond PSI-Blast.
www.sbg.bio.ic.ac.uk
Ligand search engine to EBI Macromolecule Structure Database. Provides PDB ID codes with further visualization and statistics charts.
www.ebi.ac.uk