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Binding site
From Wikipedia, the free encyclopedia
In biochemistry, a binding site is a region on a protein, DNA, or RNA to which specific other molecules and ions — in this context collectively called ligands, or more specifically, protein ligands — form a chemical bond.
The term saturation refers to the fraction of total binding sites that are occupied at any given time.
When more than one type of ligand can bind to a binding site, competition ensues.
An equilibrium exists between unbound ligands and bound ligands.
Binding sites also exhibit chemical specificity, a measure of the types of ligands that will bond, and affinity, which is a measure of the strength of the chemical bond.
A more specific type of binding site is the transcription factor binding site, present on DNA.
Drawing the active site of an enzyme
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| Topics | Active site - Allosteric regulation - Binding site - Catalytically perfect enzyme - Coenzyme - Cofactor - Cooperativity - EC number Enzyme catalysis - Enzyme inhibitor - Enzyme kinetics - Lineweaver-Burk plot - Michaelis-Menten kinetics - List of enzymes |
| Types | EC1 Oxidoreductases/list - EC2 Transferases/list - EC3 Hydrolases/list - EC4 Lyases/list - EC5 Isomerases/list - EC6 Ligases/list |